Bioinformatics Data Analysis Pipeline- TCR-Seq
Bioinformatics Data Analysis Pipeline- TCR-Seq
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ClusTCR
TCR-Seq
A Python interface for rapid clustering of large sets of CDR3 sequences with unknown antigen specificity.
Reference: https://doi.org/10.1093/bioinformatics/btab446
Contact: Qin Ma
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TCRosetta
TCR-Seq
An integrated analysis and annotation platform for T-cell receptor sequences.
Reference: https://doi.org/10.1093/gpbjnl/qzae013
Contact: Qin Ma
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Immunarch
TCR-Seq
Fast and Seamless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires in R.
Reference: https://github.com/immunomind/immunarch
Contact: Qin Ma
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scRepertoire
TCR-Seq
An R-based toolkit for single-cell immune receptor analysis.
Reference: PMID: 32789006
Contact: Qin Ma